core genome Multilocus sequence typing (cgMLST) of Brucella        cgMLST BLAST      cgMLST sequence alignment and phylogeny


Tutorial

Enter the genome sequence to predict the allelic profile :             Example:  Genome 





List of genes involved in cgMLST

Genes Locus Tags Functions
BAB_RS24045phosphoserine transaminase
BAB_RS23290aminopeptidase P family protein
BAB_RS23185membrane protein
BAB_RS22995DUF475 domain-containing protein
BAB_RS22625pyridoxine 5'-phosphate synthase
BAB_RS20850ribose-5-phosphate isomerase
BAB_RS19805PaaI family thioesterase
BAB_RS19415phosphoribosylglycinamide formyltransferase
BAB_RS18510hypothetical protein
BAB_RS18385HAD family phosphatase
MltGBAB_RS18240endolytic transglycosylase MltG
BAB_RS180304-hydroxybenzoate octaprenyltransferase
BAB_RS17610glycosyl transferase
Hsp20BAB_RS16685heat-shock protein Hsp20
FixHBAB_RS17780nitrogen fixation protein FixH
NuoFBAB_RS19880NADH-quinone oxidoreductase subunit NuoF
IclRBAB_RS17030IclR family transcriptional regulator
BAB_RS28625DUF1127 domain-containing protein
BAB_RS183054-hydroxy-3-methylbut-2-enyl diphosphate reductase
BAB_RS18160phosphatidylserine decarboxylase family protein
BAB_RS17910ribonuclease HII
UreG1BAB_RS17375Urease accessory protein UreG 1
AraCBAB_RS19175AraC family transcriptional regulator
SufEBAB_RS18790cysteine desulfuration protein SufE
YcgNBAB_RS23055YcgN family cysteine cluster protein
BAB_RS22665PDZ domain-containing protein
BAB_RS19390hypothetical protein
BAB_RS16615GNAT family N-acetyltransferase
DedABAB_RS18105DedA family protein
BAB_RS18730DUF853 domain-containing protein
BAB_RS19055hypothetical protein
BAB_RS19145DNA-directed RNA polymerase subunit omega
ExbBBAB_RS23960tonB-system energizer ExbB
BAB_RS18120pirin family protein
DinBBAB_RS19335damage-inducible protein DinB
BAB_RS17700DNA-binding response regulator
ArsCBAB_RS17840ArsC family reductase
BAB_RS18850hypothetical protein
BAB_RS19230hypothetical protein
BAB_RS19860NADH-quinone oxidoreductase subunit B
BAB_RS19865NADH-quinone oxidoreductase subunit C
BAB_RS19870NADH-quinone oxidoreductase subunit D
BAB_RS19940DUF1467 domain-containing protein
BAB_RS1999030S ribosomal protein S4
SurEBAB_RS202505'-nucleotidase SurE
DjlABAB_RS22900molecular chaperone DjlA
BAB_RS23150thioredoxin-disulfide reductase
BAB_RS23860HNH endonuclease
hrcABAB_RS16720HrcA family transcriptional regulator
BAB_RS18940ATP-binding protein
CrcBBAB_RS28345camphor resistance protein CrcB
BAB_RS18410cation transporter
BAB_RS19630hypothetical protein
BAB_RS23995deoxyuridine 5'-triphosphate nucleotidohydrolase
BAB_RS22865UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
BAB_RS17440glucose-6-phosphate isomerase
BAB_RS17690invasion protein
BAB_RS24005hypothetical protein
BAB_RS16660LPS export ABC transporter ATP-binding protein
BAB_RS18740hypothetical protein
BAB_RS18700AbrB/MazE/SpoVT family DNA-binding domain-containing protein
BAB_RS28565glucose-6-phosphate dehydrogenase
fabGBAB_RS285703-oxoacyl-ACP reductase
BAB_RS288405-deoxy-glucuronate isomerase
BAB_RS28880peroxiredoxin
EttABAB_RS22950energy-dependent translational throttle protein EttA
BAB_RS17080FAA hydrolase family protein
MocABAB_RS17065gfo/Idh/MocA family oxidoreductase
FtsQBAB_RS22820cell division protein FtsQ
BAB_RS1675016S rRNA (cytidine(1402)-2'-O)-methyltransferase
BAB_RS16695endonuclease III
LptCBAB_RS16650LPS export ABC transporter periplasmic protein LptC
BAB_RS16640integration host factor subunit beta
BAB_RS16575L,D-transpeptidase
BAB_RS16565DNA-binding response regulator
BAB_RS22710hypothetical protein
BAB_RS18300SURF1 family protein
BAB_RS18140TIGR00730 family Rossman fold protein
BAB_RS18115DUF937 domain-containing protein
GlsBBAB_RS18110GlsB/YeaQ/YmgE family stress response membrane protein
BAB_RS22610ketol-acid reductoisomerase
CrcBBAB_RS22560fluoride ion transporter CrcB
BAB_RS17340urease accessory protein ureD 1
DusABAB_RS20140tRNA dihydrouridine(20/20a) synthase DusA
BAB_RS1979530S ribosomal protein S9
BAB_RS19690riboflavin synthase
BAB_RS19670amidase
RuvBBAB_RS24115Holliday junction branch migration DNA helicase RuvB
YchFBAB_RS23325redox-regulated ATPase YchF
BAB_RS23855disulfide bond formation protein B
BAB_RS19325hypothetical protein
BAB_RS23270hypothetical protein
BAB_RS22595BA14K family protein
BAB_RS24055porin family protein
BAB_RS16740non-canonical purine NTP pyrophosphatase
BAB_RS18355hypothetical protein
BAB_RS19320DNA polymerase III subunit chi
BAB_RS18975DNA-binding response regulator
BAB_RS17905ATP synthase subunit b 2
BAB_RS16670ribosomal subunit interface protein
BAB_RS28795glycine cleavage system aminomethyltransferase T
BAB_RS18965cytochrome c-type biogenesis protein CcmH
BAB_RS22685dihydrofolate reductase
BAB_RS22575pyridoxamine 5'-phosphate oxidase family protein
BAB_RS22690thymidylate synthase
BAB_RS22800outer membrane protein assembly factor BamD
BAB_RS22935DUF2293 domain-containing protein
BAB_RS23195acyl-CoA thioesterase
DedABAB_RS23850DedA family protein
BAB_RS16680DUF1150 domain-containing protein
AsnCBAB_RS24000Lrp/AsnC family transcriptional regulator
BAB_RS24085hypothetical protein
TolRBAB_RS24100protein TolR
BAB_RS2417550S ribosomal protein L31
BAB_RS16785stress responsive protein
BAB_RS28800glycine cleavage system protein H
BAB_RS285606-phosphogluconolactonase
BAB_RS17435carbon monoxide dehydrogenase
BAB_RS18080DUF1344 domain-containing protein
BAB_RS18145hypothetical protein
BAB_RS18170KR domain-containing protein
BAB_RS1821030S ribosomal protein S18
BAB_RS182253-oxoacyl-[acyl-carrier-protein] reductase
BAB_RS18315ribonuclease HI
BAB_RS18320peroxiredoxin
BAB_RS19015uracil-DNA glycosylase
SsrABAB_RS19130SsrA-binding protein
BAB_RS19235hypothetical protein
NrdRBAB_RS19680transcriptional regulator NrdR
BAB_RS19900NADH-quinone oxidoreductase subunit J
LolDBAB_RS19955lipoprotein-releasing system ATP-binding protein LolD
BAB_RS20085NADPH:quinone oxidoreductase
BAB_RS20100acyl carrier protein
LrpBAB_RS20165Lrp/AsnC family transcriptional regulator
ErpABAB_RS20195iron-sulfur cluster insertion protein ErpA
tatABAB_RS20230twin-arginine translocase TatA/TatE family subunit
BAB_RS20830nitrogen regulatory protein P-II 1
BAB_RS19620ribonuclease D
BAB_RS18340N-acetyltransferase
BAB_RS17075NAD(P)-dependent oxidoreductase
BAB_RS20820ATPase
MarRBAB_RS19665MarR family transcriptional regulator
BAB_RS19380glutathione S-transferase
BAB_RS19340nucleoside-diphosphate kinase
BAB_RS23260tRNA-binding protein
MurRBAB_RS28780MurR/RpiR family transcriptional regulator
BAB_RS19790agmatinase
erBBAB_RS22655phosphoserine phosphatase SerB
BAB_RS22830UDP-N-acetylenolpyruvoylglucosamine reductase
BAB_RS18690transcription elongation factor
NuoEBAB_RS19875NADH-quinone oxidoreductase subunit NuoE
BAB_RS16600bifunctional uridylyltransferase/uridylyl-removing protein
BAB_RS28550bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase
BAB_RS17890ATP synthase subunit A
BAB_RS23945DUF883 domain-containing protein
BAB_RS19045thiol:disulfide oxidoreductase
BAB_RS19855NADH-quinone oxidoreductase subunit A
BAB_RS19895NADH-quinone oxidoreductase subunit I
BAB_RS20010monothiol glutaredoxin, Grx4 family
BAB_RS20760arsenate reductase (glutaredoxin)
LrpBAB_RS28590Lrp/AsnC family transcriptional regulator
OmpWBAB_RS23450OmpW family protein
BAB_RS17345urease subunit gamma
MmcBBAB_RS16570DNA repair protein MmcB-related protein